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NOTE: This page is still under construction. We will be improving its
functionality, organization, and appearance over the next few months.
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Below, you will find material that can be used at any time to learn or brush up on statistical genetics topics.
Online Workshop
Structural Equation Modeling
All
A2. Introduction to Analysis of Twin Data Using R and OpenMx - Part 1
Elizabeth Prom-Wormley, June 2022 Virtual Workshop
A3. Introduction to Analysis of Twin Data Using R and OpenMx - Part 2
Elizabeth Prom-Wormley, June 2022 Virtual Workshop
A4. Path Analysis and its Application in Models Using Twin Data
Elizabeth Prom-Wormley, June 2022 Virtual Workshop
AP2. Practical: Getting acquanted with twin modeling using OpenMx
Elizabeth Prom-Wormley, June 2022 Virtual Workshop
B1. Introduction to Structural Equation Modeling
Michael C. Neale, June 2021 Virtual Workshop
An introduction discussing the basics of structural equation modeling. Several different models are described.
B3. Linear Regression and Genetic Covariance Structure Modeling
Conor Dolan, June 2021 Virtual Workshop
B8. The Direct Symmetric Matrix Approach to Fitting Twin Models
Brad Verhulst, June 2022 Virtual Workshop
BP2. Practical on testing genetic mean effects in twin models
Conor Dolan, June 2021 Virtual Workshop
C1. Assumptions of the Classical Twin Design and Biases when Violated
Matthew C Keller, June 2022 Virtual Workshop
Assumptions of the CTD and discussion of biases that occur when these assumptions are violated. Participants will learn how to calculate biases by hand.
C2. Extended Twin Family Designs: The Motivation for Using Them
Matthew C Keller, June 2022 Virtual Workshop
F2. Multivariate twin models: from bivariate to multivariate
Conor Dolan, June 2022 Virtual Workshop
F3. Multivariate twin models: independent pathway models part 1
Dirk Pelt, June 2022 Virtual Workshop
F4. Multivariate twin models: independent pathway models part 2
Dirk Pelt, June 2022 Virtual Workshop
G4. Multivariate Longitudinal Modeling with Genetically Informative Data
Michael C. Neale, June 2022 Virtual Workshop
Statistical Genetics
All
1. Introduction to Workshop and Basics of Statistical Genetics
Benjamin Neale, June 2021 Virtual Workshop
Genomics
All
E4. Rare variant association tests in large-scale biobanks and cohorts
Wei Zhou, June 2021 Virtual Workshop
Sensitivity analyses in Mendelian randomization studies - Part 1
David M. Evans, June 2021 Virtual Workshop
Sensitivity analyses in Mendelian randomization studies - Part 2
David M. Evans, June 2021 Virtual Workshop
Sensitivity analyses in Mendelian randomization studies - Part 3
David M. Evans, June 2021 Virtual Workshop
Sensitivity analyses in Mendelian randomization studies - Part 4
David M. Evans, June 2021 Virtual Workshop
Sensitivity analyses in Mendelian randomization studies - Part 5
David M. Evans, June 2021 Virtual Workshop
Sensitivity analyses in Mendelian randomization studies - Part 6
David M. Evans, June 2021 Virtual Workshop
Statistics
All
Special Topics
Estimating and modeling SNP h2 and rg
All
B1. From correlation coefficients to variance components
Baptiste Couvy-Duchesne, June 2022 Virtual Workshop
B2. From correlation coefficients to variance components: part 2 - these models look familiar
Baptiste Couvy-Duchesne, June 2022 Virtual Workshop
B3. From correlation coefficients to variance components: Part 3 - We can write a lot more models
Baptiste Couvy-Duchesne, June 2022 Virtual Workshop
C0. Heritability of individual level data - Welcome message, part 0
Loïc Yengo, June 2021 Virtual Workshop
C1. Heritability of individual level data - Introduction, part 1
Loïc Yengo, June 2022 Virtual Workshop
C2. Heritability of individual level data - Concepts and tools, part 2
Loïc Yengo, June 2021 Virtual Workshop
C4. Heritability of individual level data - Interpretation, part 4
Loïc Yengo, June 2021 Virtual Workshop
C5. Heritability of individual level data - Overview of research topics, part 5
Loïc Yengo, June 2021 Virtual Workshop
D1. GCTA- Genetic Relationship Matrix
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David Evans, June 2022 Virtual Workshop
D3. Estimating the Importance of Maternal Genetic Effects on Offspring Phenotypes with "M-GCTA"
David Evans, June 2022 Virtual Workshop
E1. Estimating Parental Effects using Polygenic Scores Part I: Model Introduction
Jared V. Balbona, June 2022 Virtual Workshop
E2. Estimating Parental Effects using Polygenic Scores Part II: Model Extensions
Jared V. Balbona, June 2022 Virtual Workshop
G2. Explaining how S and V are estimated and what they are
Michel Nivard, June 2021 Virtual Workshop
GP1. Practical: Working through the examples on the wiki one by one: munge; ldsc; usermodel functions
Michel Nivard, June 2021 Virtual Workshop
GP2. Practical: Working through the examples on the wiki one by one: sumstats and GWAS functions
Andrew Grotzinger, June 2021 Virtual Workshop
Computing
All
L1. Introduction to the Unix/Linux command line
Jeffrey Lessem, June 2021 Virtual Workshop
A brief introduction to using the Unix/Linux command line focusing on tasks that will be necessary for practicals at the Workshop. It covers basic concepts that people who have never used a command line should be familiar with.
Mendelian Randomization
Workshop Contact Information
The Workshop Coordinator can be contacted with questions related to registration, scheduling, and travel at IBGworkshop@colorado.edu