IcalycinumPhenotypic convergence, the appearance of similar forms in independent lineages, provides an opportunity for testing the predictability of genetic evolution. Similar phenotypes in different lineages are often due to similar changes at the genetic level. One possible explanation for this pattern is that, among the possible mechanisms for producing a particular phenotype, some genetic changes are preferentially fixed during the course of evolution. This project will test the preferential fixation hypothesis by comparing the genetic basis of white flower coloration above and below the species level. The central hypothesis predicts that a wide array of mutations will be responsible for white-flowered mutants within pigmented species, but only a subset of these classes of mutations will be fixed during transitions from pigmented to white flowers at the species level. We are using Iochrominae as a study system for examining this hypothesis because this clade of roughly 35 species has four independent transitions to unpigmented flowers as well as multiple polymorphic species (like Iochroma calycinum, right).  This research involves a combination of evolutionary genomics, transcriptomics, and pigment biochemistry, and will help us to understand the relationship between segregating flower color variation in natural populations and fixed differences between species.

Supported by NSF-DEB 1355518


Relevant publications:

Larter, M., A. Dunbar-Wallis, A. E. Berardi & S. D. Smith. Convergent evolution at the pathway level: predictable regulatory changes during flower color transitions. Molecular Biology and Evolution 35: 2159-2169. Link, Reprint Request

Berardi, A. E., S. B. Hildreth, R. F. Helm, B. S. J. Winkel, and S. D. Smith. 2016. Evolutionary correlations in flavonoid production across flowers and leaves in the Iochrominae (Solanaceae). Phytochemistry 130:119-127. PDF

Ho, W. H., and S. D. Smith. 2016. Molecular evolution of anthocyanin pigmentation genes following losses of flower color. BMC Evolutionary Biology 16: 98. Link

Smith, S. D. 2016. Pleiotropy and the evolution of floral integration. New Phytologist 209: 80-85. PDF

Smith, S. D., and E. E. Goldberg. 2015. Tempo and mode of flower color evolution. American Journal of Botany 102: 1014-1025. PDF

Coburn, R. C., R. H. Griffin, and S. D. Smith. 2015. Genetic basis of a rare floral mutant in an Andean species of Solanaceae. American Journal of Botany 102: 1-9. PDF