What’s Included in our Analysis Support
- support with directory structure for analysis data
- installation of new modules/software/environment both on Flywheel and HPC cluster
- help with developing, setting up, and running the analysis pipeline
- help with EV creation to be analysis-compatible
- help with SLURM, queue submission
- status checks on jobs (down nodes, failed jobs, etc)
- support with version controlled code repository
- support with using CUmulus (hybrid cloud) for compute
- support with generation of QC reports, final z stat maps, etc, in a zipped archive
- presentations/tutorials to lab members
Here is a list of all the common neuroimaging analyses we conduct. Looking for something outside this list? Contact us!
What’s Included in NIH Compliance Platform, Flywheel!
- support with creating a containerized Gear for the desired analysis pipeline and running the analysis through Flywheel
- support submitting data and derived data to a data archive (eg NIMH data archive)
- provenance tracking on all derived data (who ran what, when, on what data, with what versions, etc)
- metadata and tagging on analysis data (eg: “failed fmriPrep reproducibility”)
- training/support on running Gears/analysis through Flywheel
- ability to use CUmulus (hybrid cloud for compute)
- Flywheel ML platform