University of Colorado at Boulder  
Sponsored Research Fiscal Year 2003-04  
 Kathy Rowlen

"After receiving my undergraduate degree in chemistry from Lawrence University in Wisconsin, I decided to pursue my doctorate at CU-Boulder where I have the opportunity to conduct graduate research on the frontier of biological and analytical chemistry. I am currently developing an instrument to count virus particles, which could be used in conjunction with our lab's Flu Chip project. Being part of CU-Boulder's chemistry department has given me the opportunity to work closely with faculty members, teach and mentor undergraduates, and perform novel research to help solve real-world biomedical challenges."

— Carrie Stoffel   
 Carrie Stoffel
  Research Highlights

 
  Understanding How Humans Impact Disease  
  Shing a Light on Tissue Engineering  
  Contemplating the Clouds  
  Tracking the Devasting Effects of Aids  
  Screening for Hearing Loss in Infants  
  Blazing New Trails with Lasers  
  Observing Colorado's Alpine Lakes  
  Identifying Flu Strains at a Glance  
  Transforming Teacher Preparation  
  Engineering Useful Solutions  
     

Reporting the Numbers

The tables and charts in this section show measurable evidence of the quality of work done by the faculty and their success at competing for sponsored project awards.

(PDF format)

  Identifying Flu Strains at a Glance

When it was announced last year that CU-Boulder had been awarded $1.7 million from the National Institute of Infectious Diseases to develop a "Flu Chip" to help diagnose respiratory illness, phones began ringing.

"There were a flurry of calls," said Kathy Rowlen, principal investigator on the award and a chemistry and biochemistry professor. "Everyone wanted to know when the chips would be available."

Top: Kathy Rowlen discusses the quality of a Flu Chip with graduate student James Smagala. Middle: Undergraduate Amy Reppert examines the results from a hybridization study. Bottom: Pipetting a sample.


No wonder. Influenza causes an estimated 500,000 deaths worldwide each year and countless other hardships. The 1918-19 Spanish Flu pandemic killed 20-40 million people in less than a year and infected roughly one-fifth of the world's population.

The Flu Chip should allow medical practitioners to swiftly differentiate types of influenza carried by infected people - perhaps within an hour - using a hand-held device about the size of a cell phone.

The team uses a robot to help build the Flu Chip. The process is relatively simple: the robot picks and places scores of different, nanoscopic-sized genetic "bits" from known influenza strains onto a three-inch-square slide known as a microarray. Then the microarray is immersed in a wash of gene fragments gleaned from fluid obtained from an infected person.

Finally, the portions that bind to specific genetic segments on the microarray (much like a key in a lock) are considered a match, indicating that a specific virus is present. Such "hits" light up like a pinball machine when the chip is inserted into a laser scanner, having previously been treated with a fluorescent dye.

It's not easy to build the Flu Chip. Its development - which also involves Associate Professor Robert Kuchta and several students in collaboration with the Centers for Disease Control and Prevention, the World Health Organization, and Bio-Rad Laboratories - is expected to take up to two years.

"One of our goals is to provide a rapid and inexpensive new tool for the global screening of respiratory illness," Rowlen said.




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