The best, current list of publications from the lab may be available on Google Scholar or on Sam's ResearchGate website.

Please email Sam if you have any problems accessing full text for any publication.

  1. CCR Smith, SM Flaxman. 2020. Leveraging whole genome sequencing data for demographic inference with approximate bayesian computation. Molecular ecology resources 20 (1), 125-139.  https://doi.org/10.1111/1755-0998.13092

  2. GA Semenov, RJ Safran, CCR Smith, SP Turbek, SP Mullen, SM Flaxman. 2019. Unifying Theoretical and Empirical Perspectives on Genomic Differentiation. Trends in ecology & evolution 34 (11), 987-995. https://doi.org/10.1016/j.tree.2019.07.008

  3. P Nosil, V Soria-Carrasco, JL Feder, SM Flaxman, Z Gompert. 2019. Local and system-wide adaptation is influenced by population connectivity.  Conservation Genetics 20 (1), 45-57.  https://link.springer.com/article/10.1007/s10592-018-1097-0

  4. Smith, C. C. R., Flaxman, S. M., Scordato, E. S. C., Kane, N. C., Hund, A. K., Sheta, B. M., & Safran, R. J. (2018). Demographic inference in barn swallows using whole-genome data shows signal for bottleneck and subspecies differentiation during the Holocene. MOLECULAR ECOLOGY, 27(21), 4200-4212. doi:10.1111/mec.14854
  5. Schilling, M. P., Mullen, S. P., Kronforst, M., Safran, R. J., Nosil, P., Feder, J. L., . . . Flaxman, S. M. (2018). Transitions from Single- to Multi-Locus Processes during Speciation with Gene Flow. GENES, 9(6), 26 pages. doi:10.3390/genes9060274 [open access]
  6. Orlofske, S. A., Flaxman, S. M., Joseph, M. B., Fenton, A., Melbourne, B. A., & Johnson, P. T. J. (2018). Experimental investigation of alternative transmission functions: Quantitative evidence for the importance of nonlinear transmission dynamics in host-parasite systems. JOURNAL OF ANIMAL ECOLOGY, 87(3), 703-715. doi:10.1111/1365-2656.12783
  7. Feder, J. L., Nosil, P., Gompert, Z., Flaxman, S. M., & Schilling, M. P. (2017). Barnacles, barrier loci and the systematic building of species. JOURNAL OF EVOLUTIONARY BIOLOGY, 30(8), 1494-1497. doi:10.1111/jeb.13105
  8. Nosil, P., Feder, J. L., Flaxman, S. M., & Gompert, Z. (2017). Tipping points in the dynamics of speciation. NATURE ECOLOGY & EVOLUTION, 1(2), 8 pages. doi:10.1038/s41559-016-0001
  9. MELBOURNE, B. A., Orlofske, S. A., Flaxman, S., Joseph, M. B., Fenton, A., & Johnson, P. T. J. (2017). Data from: Experimental investigation of alternative transmission functions: quantitative evidence for the importance of non-linear transmission dynamics in host-parasite systems.. doi:10.5061/dryad.1pk42
  10. McCreery, H. F., Correll, N., Breed, M. D., & Flaxman, S. (2016). Consensus or Deadlock? Consequences of Simple Behavioral Rules for Coordination in Group Decisions. PLOS ONE, 11(9), 20 pages. doi:10.1371/journal.pone.0162768
  11. Safran, R. J., Scordato, E. S. C., Wilkins, M. R., Hubbard, J. K., Jenkins, B. R., Albrecht, T., . . . Kane, N. C. (2016). Genome-wide differentiation in closely related populations: the roles of selection and geographic isolation. MOLECULAR ECOLOGY, 25(16), 3865-3883. doi:10.1111/mec.13740
  12. Safran, R. J., Scordato, E. S. C., Wilkins, M. R., Hubbard, J. K., Jenkins, B. R., Albrecht, T., . . . Kane, N. C. (2016). Genome-wide differentiation in closely related populations: the roles of selection and geographic isolation.. Mol Ecol, 25(16), 3865-3883. doi:10.1111/mec.13740
  13. Cook, C. N., Kaspar, R. E., Flaxman, S. M., & Breed, M. D. (2016). Rapidly changing environment modulates the thermoregulatory fanning response in honeybee groups. ANIMAL BEHAVIOUR, 115, 237-243. doi:10.1016/j.anbehav.2016.03.014
  14. Comeault, A. A., Flaxman, S. M., Riesch, R., Curran, E., Soria-Carrasco, V., Gompert, Z., . . . Nosil, P. (2015). Selection on a Genetic Polymorphism Counteracts Ecological Speciation in a Stick Insect. CURRENT BIOLOGY, 25(15), 1975-1981. doi:10.1016/j.cub.2015.05.058
  15. Feder, J. L., Nosil, P., Wacholder, A. C., Egan, S. P., Berlocher, S. H., & Flaxman, S. M. (2014). Genome-Wide Congealing and Rapid Transitions across the Speciation Continuum during Speciation with Gene Flow.. J Hered, 105(S1), 810-820. doi:10.1093/jhered/esu038
  16. Mendelson, T. C., Martin, M. D., & Flaxman, S. M. (2014). Mutation-order divergence by sexual selection: diversification of sexual signals in similar environments as a first step in speciation. ECOLOGY LETTERS, 17(9), 1053-1066. doi:10.1111/ele.12313
  17. Flaxman, S. M., Wacholder, A. C., Feder, J. L., & Nosil, P. (2014). Theoretical models of the influence of genomic architecture on the dynamics of speciation. MOLECULAR ECOLOGY, 23(16), 4074-4088. doi:10.1111/mec.12750
  18. Feder, J. L., Nosil, P., Wacholder, A. C., Egan, S. P., Berlocher, S. H., & Flaxman, S. M. (2014). Genome-Wide Congealing and Rapid Transitions across the Speciation Continuum during Speciation with Gene Flow. JOURNAL OF HEREDITY, 105, 810-820. doi:10.1093/jhered/esu038
  19. Feder, J. L., Nosil, P., & Flaxman, S. M. (2014). Assessing when chromosomal rearrangements affect the dynamics of speciation: implications from computer simulations. FRONTIERS IN GENETICS, 5, 14 pages. doi:10.3389/fgene.2014.00295
  20. Flaxman, S. M. (2013). Surfing downhill: when should population range expansion be characterized by reductions in fitness?. MOLECULAR ECOLOGY, 22(24), 5963-5965. doi:10.1111/mec.12564
  21. Williams, A. C., Flaherty, S. E., & Flaxman, S. M. (2013). Quantitative tests of multitrophic ideal free distribution theory. ANIMAL BEHAVIOUR, 86(3), 577-586. doi:10.1016/j.anbehav.2013.06.013
  22. Flaxman, S. M., Feder, J. L., & Nosil, P. (2013). GENETIC HITCHHIKING AND THE DYNAMIC BUILDUP OF GENOMIC DIVERGENCE DURING SPECIATION WITH GENE FLOW. EVOLUTION, 67(9), 2577-2591. doi:10.1111/evo.12055
  23. Feder, J. L., Flaxman, S. M., Egan, S. P., & Nosil, P. (2013). Hybridization and the build-up of genomic divergence during speciation. JOURNAL OF EVOLUTIONARY BIOLOGY, 26(2), 261-266. doi:10.1111/jeb.12009
  24. Flaxman, S. M., Feder, J. L., & Nosil, P. (2012). Spatially explicit models of divergence and genome hitchhiking. JOURNAL OF EVOLUTIONARY BIOLOGY, 25(12), 2633-2650. doi:10.1111/jeb.12013
  25. Feder, J. L., Flaxman, S. M., Egan, S. P., Comeault, A. A., & Nosil, P. (2013). Geographic Mode of Speciation and Genomic Divergence. ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 44, 44, 73-97. doi:10.1146/annurev-ecolsys-110512-135825
  26. Galanthay, T. E., & Flaxman, S. M. (2012). Generalized Movement Strategies for Constrained Consumers: Ignoring Fitness Can Be Adaptive. AMERICAN NATURALIST, 179(4), 475-489. doi:10.1086/664625
  27. Williams, A. C., & Flaxman, S. M. (2012). Can predators assess the quality of their prey's resource?. ANIMAL BEHAVIOUR, 83(4), 883-890. doi:10.1016/j.anbehav.2012.01.008
  28. Safran, R. J., Flaxman, S. M., Kopp, M., Irwin, D. E., Briggs, D., Evans, M. R., . . . Seddon, N. (2012). A robust new metric of phenotypic distance to estimate and compare multiple trait differences among populations. CURRENT ZOOLOGY, 58(3), 426-439. doi:10.1093/czoolo/58.3.426
  29. Flaxman, S. M., Lou, Y., & Meyer, F. G. (2011). Evolutionary ecology of movement by predators and prey. THEORETICAL ECOLOGY, 4(2), 255-267. doi:10.1007/s12080-011-0120-6
  30. Nosil, P., & Flaxman, S. M. (2011). Conditions for mutation-order speciation. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 278(1704), 399-407. doi:10.1098/rspb.2010.1215
  31. Flaxman, S. M., & Lou, Y. (2009). Tracking prey or tracking the prey's resource? Mechanisms of movement and optimal habitat selection by predators. JOURNAL OF THEORETICAL BIOLOGY, 256(2), 187-200. doi:10.1016/j.jtbi.2008.09.024
  32. Brennan, B. J., Flaxman, S. M., & Alonzo, S. H. (2008). Female alternative reproductive behaviors: The effect of female group size on mate assessment and copying. JOURNAL OF THEORETICAL BIOLOGY, 253(3), 561-569. doi:10.1016/j.jtbi.2008.04.003
  33. Flaxman, S. M., & Sherman, P. W. (2008). Morning sickness: Adaptive cause or nonadaptive consequence of embryo viability?. AMERICAN NATURALIST, 172(1), 54-62. doi:10.1086/588081
  34. Safran, R. J., Doerr, V. A. J., Sherman, P. W., Doerr, E. D., Flaxman, S. M., & Winkler, D. W. (2007). Group breeding in vertebrates: linking individual- and population-level approaches. EVOLUTIONARY ECOLOGY RESEARCH, 9(7), 1163-1185.
  35. Flaxman, S. M., & deRoos, C. A. (2007). Different modes of resource variation provide a critical test of ideal free distribution models. BEHAVIORAL ECOLOGY AND SOCIOBIOLOGY, 61(6), 877-886. doi:10.1007/s00265-006-0316-8
  36. Flaxman, S. M., & Reeve, H. K. (2006). Putting competition strategies into ideal free distribution models: Habitat selection as a tug of war. JOURNAL OF THEORETICAL BIOLOGY, 243(4), 587-593. doi:10.1016/j.jtbi.2006.07.012
  37. Flaxman, S. M., & Sherman, P. W. (2002). Is morning sickness maladaptive?. TRENDS IN ECOLOGY & EVOLUTION, 17(8), 359. doi:10.1016/S0169-5347(02)02557-0
    Sherman, P. W., & Flaxman, S. M. (2002). Nausea and vomiting of pregnancy in an evolutionary perspective. In AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY Vol. 186 (pp. S190-S197). BETHESDA, MARYLAND: MOSBY, INC. doi:10.1067/mob.2002.122593
  38. Sherman, P. W., & Flaxman, S. M. (2001). Protecting ourselves from food. AMERICAN SCIENTIST, 89(2), 142-151. doi:10.1511/2001.18.730
    Flaxman, S. M., & Sherman, P. W. (2000). Morning sickness: A mechanism for protecting mother and embryo. QUARTERLY REVIEW OF BIOLOGY, 75(2), 113-148. doi:10.1086/393377