Mariko Machida, Katsuaki Takechi, Hiroshi Sato, Sung Jin Chung, Haruko Kuroiwa, Susumu Takio, Motoaki Seki, Kazuo Shinozaki, Tomomichi Fujita, Mitsuyasu Hasebe, and Hiroyoshi Takano. 2006. Genes for the peptidoglycan synthesis pathway are essential for chloroplast division in moss. Proceedings of the National Academy of Sciences USA. 103 (17): 6753-6758 APR abstract | full text | article in pdf format

T. Murata and Mitsuyasu Hasebe. 2006. Microtubule branching is involved in phragmoplast expansion. Plant and Cell Physiology. 47: S41-S41 Suppl. S

Y. Oda, N. Kutsuna, T. Sano, et al. 2006. Regulation of the vacuolar and cytoplasmic localization in protonemata of Physcomitrella patens. Plant and Cell Physiology 47: S111-S111 Suppl. S

T. Fujita, K. Hashimoto, Y. Hiwatashi, et al. 2006. In vivo localization of proteins that affect asymmetric cell division by overexpression analysis in Physcomitrella patens. Plant and Cell Physiology. 47: S117-S117 Suppl. S

S. Miyazaki, N. Sumikawa, abd Mitsuyasu Hasebe. 2006. Inhibition of pollen germination in vitro and irregular segregation rate were shown in the disruptants of receptor-like kinases (RLKs) expressed in pollen and pollen tube. Plant and Cell Physiology. 47: S171-S171 Suppl. S

K. Sakakibara, H. Deguchi, and Mitsuyasu Hasebe. 2006. Functional analyses of class 2 KNOX genes in Physcomitrella patens. Plant and Cell Physiology. 47: S180-S180 Suppl. S

K. Takechi, R. Ikegami, H. Satou, et al. 2006. Functional analysis of MurE and Pbp genes related to bacteria peptidoglycan biosynthesis found in the moss Physcomitrella patens. Plant and Cell Physiology. 47: S188-S188 Suppl. S

Mikao Shigyo, Mitsuyasu Hasebe and Motomi Ito. 2006. Molecular evolution of the AP2 subfamily. Gene.
]366 (2): 256-265 FEB abstract | full text | article in pdf format

N. Aono, R. Kofuji, and Mitsuyasu Hasebe. 2005. Functional analysis of MADS-box genes which are involved in reproduction and sporophyte development in Physcomitrella patens. Plant Cell Physiology, 46: S29-S29 Suppl. S.
  
T. Fujita, K. Hashimoto, Y. Sato, et al. 2005. Identification of genes involved in cell polarity or asymmetric cell division during protoplast regeneration of Physcomitrella patens. Plant Cell Physiology, 46: S198-S198 Suppl. S.

T. Nishiyama, K. Sakakibara, and Mitsuyasu Hasebe. 2005. Functional analysis of class 1 KNOX genes in Physcomitrella patens.Plant Cell Physiology, 46: S198-S198 Suppl. S.

M. Kishi-Kaboshi, T. Murata, Mitsuyasu Hasebe, et al. 2005. Analysis of cell wall proteins co-extracted with tobacco mosaic virus movement protein.Plant Cell Physiology, 46: S206-S206 Suppl. S
   .
K. Takechi, M. Machida, A. Hayashida, et al. 2005. Loss of the PpMurE gene affects chloroplast division in moss Physcomitrella patens. Plant Cell Physiology, 46: S228-S228 Suppl. S.
  
Y. Oda, T. Fujita, Mitsuyasu Hasebe, et al. 2005. Visualization of tonoplast and analysis of its structures in Physcomitrella patens. Plant and Cell Physiology , 46: S230-S230 Suppl. S.

Mitsuko Kishi-Kaboshi, Takashi Murata, Mitsuyasu Hasebe, and Yuichiro Watanabe. 2005. An extraction method for tobacco mosaic virus movement protein localizing in plasmodesmata. Protoplasma, 225 (1-2): 85-92 APR. abstract | article in pdf format

A. Hayashida, K. Takechi, M. Sugiyama, M. Kubo, R.D. Itoh, S. Takio, T. Fujita, Y. Hiwatashi, Mitsuyasu Hasebe, and H. Takano. 2005. Isolation of mutant lines with decreased number of chloroplasts per cell from tagged mutant library of moss Physcomitrella patens. Plant Biology 7(3): 300-306. abstract | full text article | article in pdf format

Toru Nakamura, Tatsuya Fukuda, Masaru Nakano, Mitsuyasu Hasebe, Toshiaki Kameya and Akira Kanno. 2005. The modified ABC model explains the development of the petaloid perianth of Agapanthus praecox ssp. orientalis (Agapanthaceae) flowers. Plant Molecular Biology. 58(3): 435-445. abstract (pdf available from SpringerLink at this link)

Takako Tanahashi, Naomi Sumikawa, Masahiro Kato, and Mitsuyasu Hasebe . 2005. Diversification of gene function: homologs of the floral regulator FLO/LFY control the first zygotic cell division in the moss Physcomitrella patens. Development 132(7): 1727-1736. abstract | full text article | article in pdf format

Alexis Maizel, Maximilian A. Busch, Takako Tanahashi, Josip Perkovic, Masahiro Kato, Mitsuyasu Hasebe, and Detlef Weigel. 2005. The floral regulator LEAFY evolves by substitutions in the DNA binding domain. Science 308(5719): 260-263. abstract | full text article | article in pdf format

Yoichi Tanabe*, Mitsuyasu Hasebe*, Hiroyuki Sekimoto, Tomoaki Nishiyama, Masakazu Kitani, Katrin Henschel, Thomas Münster, Günter Theissen, Hisayoshi Nozaki, and Motomi Ito. 2005. Characterization of MADS-box genes in charophycean green alga and its implication for the evolution of MADS-box genes. Proceedings of the National Academy of Sciences USA 102(7): 2436-2441. abstract | full text article | article in pdf format (*both authors contributed equally)

Ryosuke Sano, Cristina M. Juárez, Barbara Hass, Keiko Sakakibara, Motomi Ito, Jo Ann Banks, Mitsuyasu Hasebe. 2005. KNOX class of homeobox genes potentially have similar function in both diploid unicellular and multicellular meristems, but not in haploid meristems. Evolution and Development 7(1): 69-78. abstract | full text article | article in pdf format

Mitsuru Hattori, Mitsuyasu Hasebe and Mamoru Sugita. 2004. Identification and characterization of cDNAs encoding pentatricopeptide repeat (PPR) proteins in the basal land plant, the moss Physcomitrella patens. Gene 343(2): 305-311. abstract (full text article and pdf available from Science Direct at this link)

Minoru N. Tamura, Shizuka Fuse, Hiroshi Azuma, and Mitsuyasu Hasebe. 2004. Biosystematic studies on the family Tofieldiaceae I. Phylogeny and circumscription of the family inferred from DNA sequences of matK and rbcL. Plant Biology 6(5): 562-567. abstract | full text article | article in pdf format

Paul G. Wolf, Carol A. Rowe, and Mitsuyasu Hasebe. 2004. High levels of RNA editing in a vascular plant chloroplast genome: analysis of transcripts from the fern Adiantum capillus-veneris. Gene 339: 89-97. abstract (pdf available from Science Direct at this link)

Tomoaki Nishiyama, Paul G. Wolf, Masanori Kugita, Robert B. Sinclair, Mamoru Sugita, Chika Sugiura, Tatsuya Wakasugi, Kyoji Yamada, Koichi Yoshinaga, Kazuo Yamaguchi, Kunihiko Ueda, and Mitsuyasu Hasebe. 2004. Chloroplast phylogeny indicates that bryophytes are monophyletic. Molecular Biology and Evolution 21(10): 1813-1819. abstract | full text article | article in pdf format

Seishiro Aoki, Koichi Uehara, Masao Imafuku, Mitsuyasu Hasebe, Motomi Ito. 2004. Phylogeny and divergence of basal angiosperms inferred from APETALA3- and PISTILLATA-like MADS-box genes. Journal of Plant Research 117(3): 229-244. abstract (article available from Springer Link at this link)

Satoko Arakawa-Kobayashi, Takashi Kobayashi, Mitsuyasu Hasebe and Toku Kanaseki. 2004. Identification of crystalline material found in the thallus of the lichen, Myelochroa leucotyliza. Journal of Structural Biology 146 (3): 393-400. abstract (full text article and pdf available from Science Direct at this link)

Rumiko Kofuji, Naomi Sumikawa, Misuzu Yamasaki, Kimihiko Kondo, Kunihiko Ueda, Motomi Ito, and Mitsuyasu Hasebe. Evolution and divergence of MADS-box gene family based on genome wide expression analyses. Molecular Biology and Evolution 20(12): 1963-1977. abstract | full text article | article in pdf format | supplementary materials

Keiko Sakakibara, Tomoaki Nishiyama, Naomi Sumikawa, Rumiko Kofuji, Takashi Murata, and Mitsuyasu Hasebe. 2003. Involvement of auxin and a homeodomain-leucine zipper I gene in rhizoid development of the moss Physcomitrella patens. Development 130(20): 4835-4846. abstract | full text article | article in pdf format

Tomoaki Nishiyama, Tomomichi Fujita, Tadasu Shin-I, Motoaki Seki, Hiroyo Nishide, Ikuo Uchiyama, Asako Kamiya, Piero Carninci, Yoshihide Hayashizaki, Kazuo Shinozaki, Yuji Kohara, and Mitsuyasu Hasebe. 2003. Comparative genomics of Physcomitrella patens gametophytic transcriptome and Arabidopsis thaliana: Implication for land plant evolution. Proceedings of the National Academy of Sciences USA 100(13): 8007-8012. abstract | full text article | article in pdf format | supplementary information

Fernando Rivadavia, Katsuhiko Kondo, Masahiro Kato, and Mitsuyasu Hasebe. 2003. Phylogeny of the sundews, Drosera (Droseraceae), based on chloroplast rbcL and nuclear 18S ribosomal DNA sequences. American Journal of Botany 90(1): 123-130. abstract | full text article | article in pdf format

Y. Itoh, Mitusyasu Hasebe, E. Davies, J. Takeda, and Yoshihiro Ozeki. 2003. Survival of Tdc transposable elements of the En/Spm superfamily in the carrot genome. Molecular Genetics and Genomics 269(1): 49-59. abstract (full text and pdf available from Springer Link at this link)

Paul G. Wolf, Carol A. Rowe, Robert B. Sinclair, and Mitsuyasu Hasebe. 2003. Complete nucleotide sequence of the chloroplast genome from a leptosporangiate fern, Adiantum capillus-veneris L. DNA Research 10(2): 59-65. full text article | article in pdf format

Yoichi Tanabe, Makoto Uchida, Mitsuyasu Hasebe, and Motomi Ito. 2003. Characterization of the Selaginella remotifolia MADS-box gene. Journal of Plant Research 116(1): 69-73. abstract (full text and pdf available from Springer Link at this link)

Katrin Henschel, Rumiko Kofuji, Mitsuyasu Hasebe, Heinz Saedler, Thomas Munster, and Gunter Theissen. 2002. Two ancient classes of MIKC-type MADS-box genes are present in the moss Physcomitrella patens. Molecular Biology and Evolution 19(6): 801-814. abstract | full text article | article in pdf format | supplementary information

Hidekazu Iwakawa, Yoshihisa Ueno, Endang Semiarti, Hitoshi Onouchi, Shoko Kojima, Hirokazu Tsukaya, Mitsuyasu Hasebe, Teppei Soma, Masaya Ikezaki, Chiyoko Machida, and Yasunori Machida. 2002. The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for formation of a symmetric flat leaf lamina, encodes a member of a novel family of proteins characterized by cysteine repeats and a leucine zipper. Plant and Cell Physiology 43(5): 467-478. abstract | full text article | article in pdf format

H. Sakaguchi, Tomomichi Fujita, T. Sato, and Mitsuyasu Hasebe. 2002. Comparative analysis of auxin distribution in haploid garactophore of Physcomitrella patens and in diploid shoots of angiosperms. Plant and Cell Physiology 43: S91-S91 Suppl. S. (not available online)

Yuji Hiwatashi, Tomomichi Fujita, Takashi Murata, and Mitsuyasu Hasebe. 2002. Intracellular localization of a kinesin-like protein, API1, in the moss Physcomitrella patens. Plant and Cell Physiology 43: S212-S212 Suppl. S. (not available online)

Takato Imaizumi, Akeo Kadota, Mitsuyasu Hasebe, and Masamitsu Wada. 2002. Cryptochrome light signals control development to suppress auxin sensitivity in the moss Physcomitrella patens. The Plant Cell 14(2): 373-386. abstract | full text article | article in pdf format

H. Kofujita, Y. Fujino, T. Sasaki, Mitsuyasu Hasebe, M. Ota, and K. Suzuki. 2001. Antifungal activitiy of the bark of Cryptomeria japonica and its relevant components. Mokuzai Gakkaishi 47(6): 479-486. (not available online)

Yuji Hiwatashi, Tomoaki Nishiyama, Tomomichi Fujita, and Mitsuyasu Hasebe. 2001. Establishment of gene-trap and enhancer-trap systems in the moss Physcomitrella patens. The Plant Journal 28(1): 105-116. abstract | full text article | article in pdf format

Satomi Shindo, Keiko Sakakibara, Ryosuke Sano, Kunihiko Ueda, and Mitsuyasu Hasebe. 2001. Characterization of a FLORICAULA/LEAFY homologue of Gnetum parvifolium and its implications for the evolution of reproductive organs in seed plants. International Journal of Plant Sciences 162(6): 1199-1209. abstract | full text article | article in pdf format

Saiko Himi, Ryosuke Sano, Tomoaki Nishiyama, Takako Tanahashi, Masahiro Kato, Kunihiko Ueda, and Mitsuyasu Hasebe. 2001. Evolution of MADS-box gene induction by FLO/LFY genes. Journal of Molecular Evolution 53(4-5): 387-393. abstract (pdf available from this link)

Keiko Sakakibara, Tomoaki Nishiyama, Masahiro Kato, and Mitsuyasu Hasebe. 2001. Isolation of homeodomain-leucine zipper genes from the moss Physcomitrella patens and the evolution of homeodomain-leucine zipper genes in land plants. Molecular Biology and Evolution 18(4): 491-502. abstract | full text article | article in pdf format

Yasuko Yoshimoto, Daisuke Higeta, Yoshio Ito, Hiroyuki Yoshida, Mitsuyasu Hasebe, and Yoshihiro Ozeki. 2000. Isolation and characterization of a cDNA for Phenylalanine ammonia-lyase (PAL) from Dianthus caryophyllus (carnation). Plant Biotechnology 17(4): 325-329. article in pdf format

Ryosuke Sano, Motomi Ito, Siro Kurita, and Mitsuyasu Hasebe. 2000. Deparia formosana (Rosenst.) as the new name for Diplazium formosanum. Acta Phytotax. Geobot. 51: 17-20. (not available online)

Ryosuke Sano, Masayuki Takamiya, Siro Kurita, Motomi Ito, and Mitsuyasu Hasebe. 2000. Diplazium subsinuatum and Di. tomitaroanum should be moved to Deparia according to molecular, morphological, and cytological characters. Journal of Plant Research 113(2): 157-163. abstract (pdf available from Springer Link at this link)

Tomoaki Nishiyama, Yuji Hiwatashi, Keiko Sakakibara, Masahiro Kato, and Mitsuyasu Hasebe. 2000. Tagged mutagenesis and gene-trap in the moss, Physcomitrella patens by shuttle mutagenesis. DNA Research 7(1): 9-17. abstract | article in pdf format

Ryosuke Sano, Masayuki Takamiya, Motomi Ito, Siro Kurita, and Mitsuyasu Hasebe. 2000. Phylogeny of lady fern group, tribe Physematieae (Dryopteridaceae) based on chloroplast rbcL gene sequences. Molecular Phylogenetics and Evolution 15(3): 403-413. abstract (full text and pdf available from ScienceDirect at this link)

Jun Yokoyama, Mitsuo Suzuki, Kunio Iwatsuki, and Mitsuyasu Hasebe. 2000. Molecular phylogeny of Coriaria, with special emphasis on the disjunct distribution. Molecular Phylogenetics and Evolution 14(1): 11-19. abstract (full text and pdf available from this link)

Satomi Shindo, Motomi Ito, Kunihiko Ueda, Masahiro Kato, and Mitsuyasu Hasebe. 1999. Characterization of MADS genes in the gymnosperm Gnetum parvifolium and its implication on the evolution of reproductive organs in seed plants. Evolution and Development 1(3): 180-190. abstract | full text article | article in pdf format

Mitsuyasu Hasebe. 1999. Evolution of reproductive organs in land plants. Journal of Plant Research 112(4): 463-474. abstract (pdf available from Springer Link at this link)

Kumi Aso, Masahiro Kato, Jo Ann Banks, and Mitsuyasu Hasebe. 1999. Characterization of homeodomain-leucine zipper genes in the fern, Ceratopteris richardii and the evolution of the homeodomain-leucine zipper gene family in vascular plants. Molecular Biology and Evolution 16(4): 544-552. abstract | article in pdf format

Mitsuyasu Hasebe, and Motomi Ito. 1999. Evolution of reproductive organs in vascular plants. In Masahiro Kato et al. eds, Biology of Biodiversity, Springer-Verlag, Tokyo. pp.243-255

Mitsuyasu Hasebe, Chi-Kuang Wen, Masahiro Kato, and Jo Ann Banks. 1998. Characterization of MADS homeotic genes in the fern Ceratopteris richardii. Proceedings of the National Academy of Sciences USA 95(11): 6222-6227. abstract | full text article | article in pdf format

Paul G. Wolf, Kathleen M. Pryer, Alan R. Smith, and Mitsuyasu Hasebe. 1998. Phylogenetic studies of extant Pteridophytes. In D. Soltis et al. eds, Molecular Systematics of Plants (2nd), Chapmann and Hall, New York. Pp. 541-556.

Mitsuyasu Hasebe, T. Ando, and Kunio Iwatsuki. 1998. Intrageneric relationships of maple trees based on the chloroplast DNA restriction fragment length polymorphisms. Journal of Plant Research 111: 441-451. (not available online)

Mitsuyasu Hasebe, and Jo Ann Banks. 1997. Evolution of MADS gene family in plants. In Kunio Iwatsuki and P.H. Raven eds., Evolution and Diversification in Land Plants, Springer-Verlag, Tokyo, pp179-197.

Mitsuyasu Hasebe. 1997. Molecular phylogeny of Ginkgo biloba. In T. Hori, ed., Ginkgo biloba, Springer-Verlag, Tokyo, pp173-181.

S. Fukada-Tanaka, A. Hoshino, Y. Hisatomi, Y. Habu, Mitsuyasu Hasebe, and S. Iida. 1997. Identification of new chalcone synthase genes for flower pigmentation in the Japanese and common morning glories. Plant and Cell Physiology 38: 754-758. (not available online)

Mitsuyasu Hasebe, Paul G. Wolf, Kathleen M. Pryer, Kunihiko Ueda, Motomi Ito, Ryosuke Sano, Gerald J. Gastony, Jun Yokoyama, James R. Manhart, Noriaki Murakami, Edmund H. Crane, Christopher H. Haufler, and Warren D. Hauk. 1995. A global analysis of fern phylogeny based on rbcL nucleotide sequences. American Fern Journal 35: 134-181. (not available online)

James Eberle, Chi-Kuang Wen, Jill Nemacheck, Mitsuyasu Hasebe, and Jo Ann Banks. 1995. Ceratopteris: a model system for studying sex-determining mechanisms in plants. International Journal of Plant Sciences 156: 359-366. article at JSTOR

Motomi Ito, Akiko Soejima, Mitsuyasu Hasebe, and Kuniaki Watanabe. 1995. A chloroplast-DNA phylogeny of Kalimeris and Aster, with reference to the generic circumscription. Journal of Plant Research 108: 93-96. (not available online)

Mitsuyasu Hasebe, Tomoyuki Omori, Miyuki Nakazawa, Toshio Sano, Masahiro Kato, and Kunio Iwatsuki. 1994. rbcL gene sequences provide evidence for the evolutionary lineages of leptosporangiate ferns. Proceedings of the National Academy of Sciences USA 91(12): 5730-5734. abstract | article in pdf format

Mitsuyasu Hasebe, Motomi Ito, Rumiko Kofuji, Kunihiko Ueda, and Kunio Iwatsuki. 1993. Phylogenetic relationships of ferns deduced from rbcL gene sequence. Journal of Molecular Evolution 37: 476-482. (not available online)

Tomohisa Yukawa, Sirou Kurita, Makoto Nishida, and Mitsuyasu Hasebe. 1993. Phylogenetic implications of chloroplast DNA restriction site variation in subtribe Dendornbiinae (Orchidaceae). Lindleyana 8: 211-221.

Duangchai Sriboonma, Mitsuyasu Hasebe, Noriaki Murakami, Jin Murata, and Kunio Iwatsuki. 1993. Phylogeny of Typhonium (Araceae) inferred from restriction fragment analysis of chloroplast DNA. Journal of Plant Research 106: 11-14. (not available online)

Mitsuyasu Hasebe, Motomi Ito, Rumiko Kofuji, Kunio Iwatsuki, and Kunihiko Ueda. 1992. Phylogenetic relationships in Gnetophyta deduced from rbcL gene sequences. Bot. Mag. Tokyo 105: 385-391. (not available online)

Mitsuyasu Hasebe, and Kunio Iwatsuki. 1992. Gene localization on the chloroplast DNA of the maidenhair fern; Adiantum capillus-veneris. Bot. Mag. Tokyo 105: 413-419. (not available online)

Mitsuyasu Hasebe, Rumiko Kofuji, Motomi Ito, Makoto Kato, Kunio Iwatsuki, and Kunihiko Ueda. 1992. Phylogeny of gymnosperms inferred from rbcL gene sequences. Bot. Mag. Tokyo 105: 673-679.

Diana B. Stein, David S. Conant, Mary E. Ahearn, Elizabeth T. Jordan, Susan A. Kirch, Mitsuyasu Hasebe, Kunio Iwatsuki, Mui K.Tan, and John A.Thomson. 1992. Structural rearrangements of the chloroplast genome provide an important phylogenetic link in ferns. Proceedings of the National Academy of Sciences USA 89(5): 1856-1860. abstract | article in pdf format

Mitsuyasu Hasebe, and Kunio Iwatsuki. 1990. Adiantum capillus-veneris chloroplast DNA clone banks: as useful heterologous probes in the systematics of the leptosporangiate ferns. American Fern Journal 80: 20-25. (not available online)

Mitsuyasu Hasebe, and Kunio Iwatsuki. 1990. Chloroplast DNA from Adiantum capillus-veneris L., a fern species (Adiantaceae); clone bank, physical map and unusual gene localization in comparison with angiosperm chloroplast DNA. Current Genetics 17: 359-364. (not available online)

Michio Homma, Kazuhiro Kutsukake, Mitsuyasu Hasebe, Tetsuo IIno, and Robert M. Macnab. 1990. FlgB, FlgC, FlgF and FlgG A Family of structurally related proteins in the flagellar basal body of Salmonella typhimurium. Journal of Molecular Biology 211: 465-477. (not available online)